shell execution and other tools gone after update

Open 💬 3 comments Opened Aug 27, 2026 by HunterSherms
💡 Likely answer: A maintainer (github-actions[bot], contributor) responded on this thread — see the highlighted reply below.

What version of Codex CLI is running?

codex-cli 0.150.1

What subscription do you have?

API

Which model were you using?

openai.gpt-5.6-sol

What platform is your computer?

Darwin 24.6.0 arm64 arm

What terminal emulator and version are you using (if applicable)?

iTerm2

Codex doctor report

{
  "schemaVersion": 1,
  "generatedAt": "1787839762s since unix epoch",
  "overallStatus": "warning",
  "codexVersion": "0.150.1",
  "checks": {
    "app_server.status": {
      "id": "app_server.status",
      "category": "app-server",
      "status": "ok",
      "summary": "background server is not running",
      "details": {
        "control socket": "/Users/hunter.sherman/.codex/app-server-control/app-server-control.sock",
        "daemon state dir": "/Users/hunter.sherman/.codex/app-server-daemon",
        "mode": "ephemeral",
        "pid file": "/Users/hunter.sherman/.codex/app-server-daemon/app-server.pid (missing)",
        "settings": "/Users/hunter.sherman/.codex/app-server-daemon/settings.json (missing)",
        "status": "not running",
        "update-loop pid file": "/Users/hunter.sherman/.codex/app-server-daemon/app-server-updater.pid (missing)"
      },
      "remediation": null,
      "durationMs": 0
    },
    "auth.credentials": {
      "id": "auth.credentials",
      "category": "auth",
      "status": "ok",
      "summary": "OpenAI auth is not required for the active model provider",
      "details": {
        "auth file": "/Users/hunter.sherman/.codex/auth.json",
        "auth storage mode": "File",
        "model provider requires OpenAI auth": "false"
      },
      "remediation": null,
      "durationMs": 0
    },
    "config.load": {
      "id": "config.load",
      "category": "config",
      "status": "ok",
      "summary": "config loaded",
      "details": {
        "CODEX_HOME": "/Users/hunter.sherman/.codex",
        "config.toml": "/Users/hunter.sherman/.codex/config.toml",
        "config.toml parse": "ok",
        "cwd": "/Users/hunter.sherman/IdeaProjects/aiops-ml",
        "enabled feature flags": "shell_tool, view_image, unified_exec, unified_exec_zsh_fork, shell_snapshot, code_mode_host, terminal_resize_reflow, sqlite, hooks, enable_request_compression, unbounded_connection_retries, multi_agent, apps, tool_search_always_defer_mcp_tools, tool_suggest, plugins, in_app_browser, in_app_chat, in_app_dictation, in_app_local_automation, in_app_updates, browser_use, browser_use_full_cdp_access, browser_use_external, computer_use, remote_plugin, plugin_sharing, image_generation, resize_all_images, item_ids, skill_mcp_dependency_install, skill_search, mentions_v2, steer, guardian_approval, goals, collaboration_modes, tool_call_mcp_elicitation, auth_elicitation, personality, fast_mode, tui_app_server, remote_compaction_v2, compaction_image_budget, workspace_dependencies",
        "feature flag overrides": "none",
        "feature flags enabled": "45",
        "log dir": "/Users/hunter.sherman/.codex/log",
        "mcp servers": "0",
        "model": "openai.gpt-5.6-sol",
        "model provider": "llm-ai-ts-net",
        "sqlite home": "/Users/hunter.sherman/.codex"
      },
      "remediation": null,
      "durationMs": 0
    },
    "git.environment": {
      "id": "git.environment",
      "category": "git",
      "status": "ok",
      "summary": "git version 2.33.0",
      "details": {
        ".git entry": "directory",
        "PATH git #1": "/usr/local/bin/git",
        "PATH git #2": "/usr/bin/git",
        "PATH git entries": "2",
        "git branch": "SWONE-371-prompt-arguments",
        "git build options": "git version 2.33.0; cpu: x86_64; no commit associated with this build; sizeof-long: 8; sizeof-size_t: 8; shell-path: /bin/sh",
        "git exec path": "/usr/local/git/libexec/git-core",
        "git version": "git version 2.33.0",
        "repo detected": "true",
        "repo root": "/Users/hunter.sherman/IdeaProjects/aiops-ml",
        "selected git": "/usr/local/bin/git"
      },
      "remediation": null,
      "durationMs": 30
    },
    "installation": {
      "id": "installation",
      "category": "install",
      "status": "ok",
      "summary": "installation looks consistent",
      "details": {
        "PATH codex #1": "/opt/homebrew/bin/codex",
        "current executable": "/opt/homebrew/bin/codex",
        "install context": "brew (package /opt/homebrew/Caskroom/codex/0.150.1, bin /opt/homebrew/Caskroom/codex/0.150.1/bin, resources /opt/homebrew/Caskroom/codex/0.150.1/codex-resources, path /opt/homebrew/Caskroom/codex/0.150.1/codex-path)",
        "managed by bun": "false",
        "managed by npm": "false",
        "managed by pnpm": "false",
        "managed package root": "not set"
      },
      "remediation": null,
      "durationMs": 6
    },
    "mcp.config": {
      "id": "mcp.config",
      "category": "mcp",
      "status": "ok",
      "summary": "no MCP servers configured",
      "details": {},
      "remediation": null,
      "durationMs": 0
    },
    "network.env": {
      "id": "network.env",
      "category": "network",
      "status": "ok",
      "summary": "network-related environment looks readable",
      "details": {
        "managed proxy": "not configured",
        "proxy env vars": "none",
        "respect system proxy": "disabled",
        "system proxy": "direct"
      },
      "remediation": null,
      "durationMs": 1
    },
    "network.provider_reachability": {
      "id": "network.provider_reachability",
      "category": "reachability",
      "status": "ok",
      "summary": "active provider endpoints are reachable over HTTP",
      "details": {
        "llm-ai-ts-net API inference URL": "http://ai-gateway.tail692491.ts.net/v1/<redacted> reachable (HTTP 404)",
        "llm-ai-ts-net API route probe": "http://ai-gateway.tail692491.ts.net/v1/<redacted> route exists (HTTP 200)",
        "reachability mode": "provider auth"
      },
      "remediation": null,
      "durationMs": 378
    },
    "network.websocket_reachability": {
      "id": "network.websocket_reachability",
      "category": "websocket",
      "status": "ok",
      "summary": "Responses WebSocket is not enabled for the active provider",
      "details": {
        "model provider": "llm-ai-ts-net",
        "provider name": "Tailscale AI Gateway",
        "proxy env vars": "none",
        "supports websockets": "false",
        "wire API": "responses"
      },
      "remediation": null,
      "durationMs": 0
    },
    "runtime.provenance": {
      "id": "runtime.provenance",
      "category": "runtime",
      "status": "ok",
      "summary": "running brew on macos-aarch64",
      "details": {
        "commit": "unknown",
        "current executable": "/opt/homebrew/bin/codex",
        "install method": "brew (package /opt/homebrew/Caskroom/codex/0.150.1, bin /opt/homebrew/Caskroom/codex/0.150.1/bin, resources /opt/homebrew/Caskroom/codex/0.150.1/codex-resources, path /opt/homebrew/Caskroom/codex/0.150.1/codex-path)",
        "platform": "macos-aarch64",
        "version": "0.150.1"
      },
      "remediation": null,
      "durationMs": 0
    },
    "runtime.search": {
      "id": "runtime.search",
      "category": "search",
      "status": "ok",
      "summary": "search is OK (bundled)",
      "details": {
        "search command": "/opt/homebrew/Caskroom/codex/0.150.1/codex-path/rg",
        "search command readiness": "file exists",
        "search provider": "bundled"
      },
      "remediation": null,
      "durationMs": 0
    },
    "sandbox.helpers": {
      "id": "sandbox.helpers",
      "category": "sandbox",
      "status": "ok",
      "summary": "sandbox configuration is readable",
      "details": {
        "approval policy": "OnRequest",
        "codex-linux-sandbox helper": "none",
        "execve wrapper helper": "/Users/hunter.sherman/.codex/tmp/arg0/codex-arg0egMC7j/codex-execve-wrapper",
        "filesystem sandbox": "restricted",
        "network sandbox": "restricted"
      },
      "remediation": null,
      "durationMs": 0
    },
    "security.endpoint": {
      "id": "security.endpoint",
      "category": "security",
      "status": "warning",
      "summary": "endpoint protection detected; Codex exclusions are unverified",
      "details": {
        "Codex exclusions": "not verified",
        "endpoint products": "Microsoft Defender",
        "exclusion targets": "signing team 2DC432GLL2 plus the installed Codex app identity, signed codex agent, and required helpers"
      },
      "issues": [
        {
          "severity": "warning",
          "cause": "Microsoft Defender can interfere with Codex. Verify Codex exclusions.",
          "measured": "not verified",
          "expected": "Codex application and helper exclusions",
          "remedy": "Microsoft Defender: Add a certificate or executable-path exclusion for Codex and its helpers. If Attack Surface Reduction blocks Codex, add a rule exclusion. If Controlled Folder Access blocks Codex, allow the app.",
          "fields": [
            "Codex exclusions"
          ]
        }
      ],
      "remediation": "ask your security administrator to verify Codex exclusions and required helper allowances",
      "durationMs": 15
    },
    "state.paths": {
      "id": "state.paths",
      "category": "state",
      "status": "ok",
      "summary": "state paths and databases are inspectable",
      "details": {
        "CODEX_HOME": "/Users/hunter.sherman/.codex (dir)",
        "active rollout files": "311 files, 465518906 total bytes, 1496845 average bytes",
        "archived rollout files": "0 files, 0 total bytes, 0 average bytes",
        "goals DB": "/Users/hunter.sherman/.codex/goals_1.sqlite (file)",
        "goals DB integrity": "ok",
        "log DB": "/Users/hunter.sherman/.codex/logs_2.sqlite (file)",
        "log DB integrity": "ok",
        "log dir": "/Users/hunter.sherman/.codex/log (dir)",
        "memories DB": "/Users/hunter.sherman/.codex/memories_1.sqlite (file)",
        "memories DB integrity": "ok",
        "queue DB": "/Users/hunter.sherman/.codex/queue_1.sqlite (file)",
        "queue DB integrity": "ok",
        "sqlite home": "/Users/hunter.sherman/.codex (dir)",
        "state DB": "/Users/hunter.sherman/.codex/state_5.sqlite (file)",
        "state DB integrity": "ok",
        "thread history DB": "/Users/hunter.sherman/.codex/thread_history_1.sqlite (file)",
        "thread history DB integrity": "ok"
      },
      "remediation": null,
      "durationMs": 326
    },
    "state.rollout_db_parity": {
      "id": "state.rollout_db_parity",
      "category": "threads",
      "status": "ok",
      "summary": "rollout files and state DB thread inventory agree",
      "details": {
        "default model provider": "llm-ai-ts-net",
        "rollout DB active files": "311",
        "rollout DB active rows": "311",
        "rollout DB archive mismatches": "0",
        "rollout DB archived files": "0",
        "rollout DB archived rows": "0",
        "rollout DB duplicate DB paths": "0",
        "rollout DB duplicate rollout thread ids": "0",
        "rollout DB malformed file names": "0",
        "rollout DB missing active rows": "0",
        "rollout DB missing archived rows": "0",
        "rollout DB model providers": "llm-ai-ts-net=212, azure=99",
        "rollout DB rows": "311",
        "rollout DB scan cap reached": "false",
        "rollout DB scan errors": "0",
        "rollout DB sources": "cli=311",
        "rollout DB stale rows": "0"
      },
      "remediation": null,
      "durationMs": 174
    },
    "system.disk": {
      "id": "system.disk",
      "category": "disk",
      "status": "ok",
      "summary": "sufficient free disk space (92.0 GiB)",
      "details": {
        "CODEX_HOME available": "92.0 GiB",
        "failure threshold": "1.0 GiB",
        "warning threshold": "5.0 GiB",
        "worktree available": "92.0 GiB"
      },
      "remediation": null,
      "durationMs": 0
    },
    "system.environment": {
      "id": "system.environment",
      "category": "system",
      "status": "ok",
      "summary": "OS language en-US",
      "details": {
        "EDITOR": "not set",
        "LANG": "en_US.UTF-8",
        "VISUAL": "not set",
        "os": "Mac OS 15.7.3 [64-bit]",
        "os language": "en-US",
        "os type": "Mac OS",
        "os version": "15.7.3"
      },
      "remediation": null,
      "durationMs": 2
    },
    "terminal.env": {
      "id": "terminal.env",
      "category": "terminal",
      "status": "ok",
      "summary": "terminal metadata was detected",
      "details": {
        "COLORFGBG": "15;0",
        "COLORTERM": "truecolor",
        "TERMINFO_DIRS entry": [
          "/Applications/iTerm.app/Contents/Resources/terminfo (dir)",
          "/usr/share/terminfo (dir)"
        ],
        "TERM_PROGRAM": "iTerm.app",
        "color output": "enabled",
        "effective locale": "en_US.UTF-8",
        "stderr is terminal": "true",
        "stdin is terminal": "true",
        "stdout is terminal": "true",
        "terminal": "iTerm2",
        "terminal size": "124x94",
        "terminal version": "3.6.11"
      },
      "remediation": null,
      "durationMs": 1
    },
    "terminal.title": {
      "id": "terminal.title",
      "category": "title",
      "status": "ok",
      "summary": "terminal title default",
      "details": {
        "terminal title activity": "true",
        "terminal title items": "activity, project-name",
        "terminal title project source": "git repo root",
        "terminal title project value": "aiops-ml",
        "terminal title source": "default"
      },
      "remediation": null,
      "durationMs": 0
    },
    "updates.status": {
      "id": "updates.status",
      "category": "updates",
      "status": "ok",
      "summary": "update configuration is locally consistent",
      "details": {
        "cached latest version": "0.150.1",
        "check for update on startup": "true",
        "last checked at": "2026-08-27T13:32:43.484910Z",
        "latest version": "0.150.1",
        "latest version status": "current version is not older",
        "update action": "brew upgrade --cask codex",
        "version cache": "/Users/hunter.sherman/.codex/version.json"
      },
      "remediation": null,
      "durationMs": 53
    }
  }
}

What issue are you seeing?

This morning I ran the most recent update. Codex seems to have lost the use of all tools except file-editing.

What steps can reproduce the bug?

Uploaded thread: 01a01bb8-357f-7ba2-9d9c-9b1281216e58

What is the expected behavior?

_No response_

Additional information

_No response_

View original on GitHub ↗

3 Comments

github-actions[bot] contributor · 21 hours ago

Potential duplicates detected. Please review them and close your issue if it is a duplicate.

  • #40904

Powered by Codex Action

HunterSherms · 20 hours ago

0.149.1 works. any of the 0.150.X versions are broken

etraut-openai contributor · 3 hours ago

(response from codex analysis)

I investigated the uploaded logs and compared the released 0.149.1 and 0.150.1 macOS packages. So far, I haven’t reproduced a shell-tool registration regression.

Both versions successfully executed pwd using a local mock inference server, including with zsh-fork enabled. I confirmed the reported transition from shell_command to exec_command/write_stdin, but the replacement tools remained available and worked.

In the uploaded session, the model never attempts a shell call after updating. It searches tool_search, gets empty results, and concludes shell access is unavailable. However, tool_search searches deferred tools, so an empty result does not establish that built-in shell tools are missing.

This doesn’t rule out a regression in your setup or in how the model discovers tools. The mock tests verify tool availability and execution, not actual model behavior.

Could you upload feedback from a fresh failing run pwd session and share your redacted provider/model and tool-related configuration? For the official-provider reproduction, the retained rollout would also help. Please keep credentials and private session contents out of public comments.